Protein Info for MPMX20_04064 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 transmembrane" amino acids 53 to 67 (15 residues), see Phobius details PF00296: Bac_luciferase" amino acids 8 to 305 (298 residues), 133.3 bits, see alignment E=6.2e-43 TIGR03558: luciferase family oxidoreductase, group 1" amino acids 8 to 328 (321 residues), 447.1 bits, see alignment E=1.9e-138

Best Hits

Swiss-Prot: 92% identical to YHBW_ECOLI: Luciferase-like monooxygenase (yhbW) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 98% identity to enc:ECL_04542)

Predicted SEED Role

"Luciferase-like monooxygenase (EC 1.14.-.-)" (EC 1.14.-.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.14.-.-

Use Curated BLAST to search for 1.14.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (335 amino acids)

>MPMX20_04064 hypothetical protein (Enterobacter sp. TBS_079)
MTDKTIPFSVLDLAPIPQGSSAREAFTHSLDLARLAEKRGYHRYWLAEHHNMVGIASAAT
SVLIGYLAANTTTLHLGSGGVMLPNHAPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPT
MRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLA
AQLGLPFAFASHFAPDMLHQALHLYRTNFKPSERLEKPYAMVCINIVAADSNRDAEFLFT
SMQQAFVKLRRGETGQLPPPVENMHQLWSASEQYGVQQALSMSLVGDKAKVRHGLEAVLR
ETQADEIMVNGQIFDHQARLHSFDLAMQVKEEVSG