Protein Info for MPMX20_03742 in Enterobacter sp. TBS_079

Annotation: HTH-type transcriptional regulator GalR

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 PF00356: LacI" amino acids 30 to 75 (46 residues), 60.6 bits, see alignment 1.5e-20 PF00532: Peripla_BP_1" amino acids 155 to 284 (130 residues), 29.4 bits, see alignment E=8.7e-11 PF13377: Peripla_BP_3" amino acids 184 to 342 (159 residues), 89.1 bits, see alignment E=5.6e-29

Best Hits

KEGG orthology group: None (inferred from 86% identity to eae:EAE_18975)

Predicted SEED Role

"AscBF operon repressor" in subsystem Beta-Glucoside Metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (346 amino acids)

>MPMX20_03742 HTH-type transcriptional regulator GalR (Enterobacter sp. TBS_079)
MKPPVGGAKILKVGYVKITKTHHAENAMPTIDDVSRLANVSRATVSRVLTGTRGVREESR
EAVLRAVEELNYRPSFAAQNLASQSSSYVGLVLSAKDESSGARLLPALSRAMKALNKTLI
VEYVNDPVEQAVTVDDLQRQCVAVVVFGPVAAGSAENVISFDRPVVDAKPQGYDFAFATE
SACRYMTGKGHRNIALVIDSEHDDNSKKMVEGYRNVLQNYSLPFNRQLVLTANEDVEQAL
LTLINSLSKFSAIVVKRDAYAAEAMRLFREFGISVPQEVSLLSLEDSPLATQLYPQLTCI
SWPMDQLLTQCVERIKSLVDGRPVRTSELSPVIGKLTPRQSVMEKS