Protein Info for MPMX20_03415 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 transmembrane" amino acids 16 to 36 (21 residues), see Phobius details amino acids 75 to 100 (26 residues), see Phobius details amino acids 112 to 134 (23 residues), see Phobius details amino acids 153 to 170 (18 residues), see Phobius details amino acids 218 to 238 (21 residues), see Phobius details amino acids 244 to 271 (28 residues), see Phobius details amino acids 292 to 316 (25 residues), see Phobius details PF03824: NicO" amino acids 73 to 179 (107 residues), 71.5 bits, see alignment E=3.9e-24 amino acids 190 to 316 (127 residues), 57.9 bits, see alignment E=5.3e-20

Best Hits

KEGG orthology group: None (inferred from 91% identity to enc:ECL_03883)

Predicted SEED Role

"putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (326 amino acids)

>MPMX20_03415 hypothetical protein (Enterobacter sp. TBS_079)
MSVIASPARKSRRWLHLWPLALFLLLAVCGALWLWHAWPQVMMKSIVWQREVNQQMSGLL
KAVAENPTKAGGSLLAFSFLYGVLHALGPGHGKIVIATWLATHPSRLKSSIGLTLASSLL
QGGVAIALVVVVLSLLRLPARQLHISSFWLEKGSYALVGVLGLLLCWRALKKLRALLHKP
QFRAFTPHHEHTANCGCGHQHLPTQAQLQNGDDWRARLMVVLSMGMRPCSGAIMVLLFSK
VMGVFGWGMLSALAMAAGTSLTISSLALLVHSFRQLAVKLSGNKTPVLWRQVGWTTLALA
GGMILLVAAVTMWMSAVPVGRGLRPF