Protein Info for MPMX20_03195 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 504 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 46 to 71 (26 residues), see Phobius details amino acids 78 to 97 (20 residues), see Phobius details amino acids 110 to 134 (25 residues), see Phobius details amino acids 142 to 163 (22 residues), see Phobius details amino acids 172 to 193 (22 residues), see Phobius details amino acids 205 to 225 (21 residues), see Phobius details amino acids 260 to 282 (23 residues), see Phobius details amino acids 323 to 344 (22 residues), see Phobius details amino acids 356 to 381 (26 residues), see Phobius details amino acids 388 to 408 (21 residues), see Phobius details amino acids 415 to 433 (19 residues), see Phobius details amino acids 471 to 491 (21 residues), see Phobius details PF01970: TctA" amino acids 20 to 440 (421 residues), 516.8 bits, see alignment E=1.9e-159

Best Hits

Swiss-Prot: 41% identical to YZ2R_AGRVI: Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region from Agrobacterium vitis

KEGG orthology group: K07793, putative tricarboxylic transport membrane protein (inferred from 95% identity to sec:SC2720)

Predicted SEED Role

"Tricarboxylate transport membrane protein TctA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (504 amino acids)

>MPMX20_03195 hypothetical protein (Enterobacter sp. TBS_079)
MDTWIYLSQGFAVAMTPENLVIALIGCFVGTIVGLLPGLGPINGVAILLPLAFALHLPAE
SALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPMARQGRGGVALSISAVSSF
CGSLIAIGGIILFAPALAQWSLAFGPAEYFALMVFAIACLGSMMAQNPLKSFLSALIGLG
LATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSVSEILLMLEHTSSGQTLVRKTGR
MLFSAKEGAQCIGATLRSSVIGFFVGILPGAGATIASAITYMTEKKLSGNSDSFGKGDIR
GVAAPEAANNASACGSFIPMLTLGVPGSGTTAVMMGALTLYNITPGPAMFTEQPDIVWGL
IAALLIANVMLLVMNIPLIGLFTRMLTIPLWFLVPAIAAVSAVGVYAVHSTTFDLVLMVL
LGVLGYILRKMHFPMSPLILGFVLGEMLEQNLRRALSISNGNMSILWDSSVTKVLLAMAI
LVIVVPPVLRLLRRRQRKPAPDIG