Protein Info for MPMX20_03165 in Enterobacter sp. TBS_079

Annotation: putative MFS-type transporter YfcJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 395 transmembrane" amino acids 34 to 54 (21 residues), see Phobius details amino acids 84 to 109 (26 residues), see Phobius details amino acids 149 to 166 (18 residues), see Phobius details amino acids 172 to 192 (21 residues), see Phobius details amino acids 218 to 237 (20 residues), see Phobius details amino acids 249 to 271 (23 residues), see Phobius details amino acids 283 to 301 (19 residues), see Phobius details amino acids 307 to 330 (24 residues), see Phobius details amino acids 341 to 364 (24 residues), see Phobius details amino acids 371 to 387 (17 residues), see Phobius details PF07690: MFS_1" amino acids 22 to 257 (236 residues), 94.4 bits, see alignment E=1e-30 amino acids 241 to 392 (152 residues), 55.1 bits, see alignment E=9e-19 PF00083: Sugar_tr" amino acids 47 to 190 (144 residues), 30.3 bits, see alignment E=3.1e-11 amino acids 226 to 358 (133 residues), 34.8 bits, see alignment E=1.4e-12

Best Hits

KEGG orthology group: None (inferred from 75% identity to ddd:Dda3937_03471)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (395 amino acids)

>MPMX20_03165 putative MFS-type transporter YfcJ (Enterobacter sp. TBS_079)
MLSRFKVLSRIPRGVWVVGGVSMLMDISSESIHSLLPLFMVTTLGTSVLVIGLIEGLAEA
TALFIKVFSGAISDYLGKRKGLALLGYGLGALSKPFFALASSSGMVLGARLMDRAGKGIR
GAPRDALVADITPPELRGAAYGLRQSMDTTGAFLGPLLAVGLMLLLHNDFRAVFWIALIP
GFLSVALLYFGLKEPKTPVEHKRTNPIKRENLTRLGKSCWWVIGLGAVFTLARFSEAFLV
LRAQQSGVPLALIPLVMVVMNVIYSFSAYPFGKLSDGMSHTRLLQWGLVVLIAADVVLAL
STHWTGIIVGVALWGMHMGMTQGLLAAMVAKTAPADLRGTAFGLFSLVSGVGLLMASVGA
GAIWELWGAEYTFYAGAVICLLTLLYLRKTPAEVR