Protein Info for MPMX20_02274 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 321 PF01590: GAF" amino acids 30 to 154 (125 residues), 58.7 bits, see alignment E=1.4e-19 PF13185: GAF_2" amino acids 31 to 154 (124 residues), 37.9 bits, see alignment E=3.2e-13 TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 163 to 317 (155 residues), 138.4 bits, see alignment E=9.4e-45 PF00990: GGDEF" amino acids 164 to 318 (155 residues), 128.8 bits, see alignment E=2.6e-41

Best Hits

KEGG orthology group: None (inferred from 94% identity to enc:ECL_01986)

Predicted SEED Role

"FOG: GGDEF domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (321 amino acids)

>MPMX20_02274 hypothetical protein (Enterobacter sp. TBS_079)
MKTPATPENETERLNSLRESGLLEIDSSPAFDRLTRLAKRFFQVPLAMVNLIDEHSLIVK
SADGQAPDSVPRNISFCGHTILSEAPLVVGDMRQDDRFADNPLVAGEPGVRFYAGFPLRL
RDGASVGSLCLIDYSPREFTAADLAVLGDLGALAEDEFAAVSAATTDELTGLFNRRGFNQ
LVRFTLSVARRRAEPLTLGWLDLDRFKEINDRYGHEEGDKALNVMAQLMRSSFREADLLV
RFGGDEFAVLFADTDEQGAWIAMQYLAEQVENYNARKLHPWSLLFSWGLSEFDHNGHDLQ
QWLKEADEKMYAMKQQRHRER