Protein Info for MPMX20_02221 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 467 transmembrane" amino acids 12 to 37 (26 residues), see Phobius details amino acids 56 to 77 (22 residues), see Phobius details amino acids 97 to 120 (24 residues), see Phobius details amino acids 127 to 148 (22 residues), see Phobius details amino acids 184 to 208 (25 residues), see Phobius details amino acids 219 to 237 (19 residues), see Phobius details amino acids 322 to 346 (25 residues), see Phobius details amino acids 358 to 378 (21 residues), see Phobius details amino acids 408 to 429 (22 residues), see Phobius details PF01654: Cyt_bd_oxida_I" amino acids 9 to 437 (429 residues), 560.5 bits, see alignment E=9.5e-173

Best Hits

KEGG orthology group: K00425, cytochrome bd-I oxidase subunit I [EC: 1.10.3.-] (inferred from 95% identity to enc:ECL_02047)

MetaCyc: 76% identical to cyanide insensitive ubiquinol oxidase subunit I (Pseudomonas putida KT2440)
RXN-6883 [EC: 1.10.3.11]

Predicted SEED Role

"putative Cytochrome bd2, subunit I" in subsystem Terminal cytochrome d ubiquinol oxidases or Terminal cytochrome oxidases

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 1.10.3.-

Use Curated BLAST to search for 1.10.3.- or 1.10.3.11

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (467 amino acids)

>MPMX20_02221 hypothetical protein (Enterobacter sp. TBS_079)
MFELDAFHLARIQFAFTVSFHILFPAITIGLASYLVVLEGMWLRTKNEVWRSLYHFWLKI
FAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW
NKVGPGLHFFSTCMVALGTLMSTFWILASNSWMHTPQGFSIQNGQVIPEDWLAIIFNPSF
PYRLIHMAIAAFLSSALFVGASGAWHLLRGNDTPAIRTMFSMAMWMALLVAPIQAIVGDM
HGLNTLEHQPAKIAAIEGHWENPPGEATPLLLFGLPDMEQERTRYALEIPALGSLILTHS
LDKQVPALKDFPKEDRPNSPIVFWSFRIMVGMGLLMITLGLVSVWLRYRHRLYQSRPFHW
FALCMGPAGLLALLAGWVTTEVGRQPWVVYGYLRTIDAVSLHSTLQMSISLLAFFVVYSS
VFGVGYVYLLRLIKKGPQPVDTLTSNTSGTPARPLSAAESVPEQERN