Protein Info for MPMX20_01910 in Enterobacter sp. TBS_079

Annotation: Acetyl-CoA acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 393 PF00108: Thiolase_N" amino acids 4 to 263 (260 residues), 345.2 bits, see alignment E=3.5e-107 TIGR01930: acetyl-CoA C-acyltransferase" amino acids 6 to 391 (386 residues), 492 bits, see alignment E=5.9e-152 PF00109: ketoacyl-synt" amino acids 79 to 120 (42 residues), 27.9 bits, see alignment 2.6e-10 PF02803: Thiolase_C" amino acids 272 to 392 (121 residues), 172.2 bits, see alignment E=5.1e-55

Best Hits

Swiss-Prot: 70% identical to ATOB_PSEAE: Acetyl-CoA acetyltransferase (atoB) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K00626, acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (inferred from 90% identity to enc:ECL_02404)

MetaCyc: 68% identical to acetyl-CoA C-acetyltransferase (Pseudomonas simiae)
Acetyl-CoA C-acyltransferase. [EC: 2.3.1.16, 2.3.1.9]

Predicted SEED Role

"3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)" (EC 2.3.1.16, EC 2.3.1.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.16, 2.3.1.9

Use Curated BLAST to search for 2.3.1.16 or 2.3.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (393 amino acids)

>MPMX20_01910 Acetyl-CoA acetyltransferase (Enterobacter sp. TBS_079)
MNEVMIVGATRTPVGSFRGSLSSLSAVELGAVAVRRLLENSQLCADQVDELIFGQVLTAG
CGQNPARQTALMAGLPVSTPATTVNLVCGAGLKAVQLAAQAIRCGDADVVIAGGQESMSN
APYLLDGARSGLRFGHTGLQDSMITDGLWDAFNDYHMGITAENVARQYGISREQQDAFAA
RSQQKAASAIARGLFDAEMAPVTVSEGKKPPSLVSSDEQPRPGTTAEQLAQLRPAFRRED
GTVTAGNASTLNDGAAAVLLMSGEKARESGLPILGRVVSYAVTGVDPSVMGIGPVSACQT
ALARAGWALDEVDVIEANEAFAAQALAVGKLLGWDERKVNVNGGAIALGHPIGASGCRIL
VTLLHEMQRRDAKKGLVTLCVGGGQGIALTLAR