Protein Info for MPMX20_01676 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 transmembrane" amino acids 16 to 34 (19 residues), see Phobius details amino acids 41 to 59 (19 residues), see Phobius details amino acids 79 to 102 (24 residues), see Phobius details amino acids 134 to 163 (30 residues), see Phobius details amino acids 204 to 226 (23 residues), see Phobius details amino acids 237 to 259 (23 residues), see Phobius details amino acids 266 to 283 (18 residues), see Phobius details amino acids 294 to 316 (23 residues), see Phobius details amino acids 336 to 357 (22 residues), see Phobius details amino acids 371 to 388 (18 residues), see Phobius details amino acids 399 to 420 (22 residues), see Phobius details PF00528: BPD_transp_1" amino acids 219 to 421 (203 residues), 78.3 bits, see alignment E=3.2e-26

Best Hits

Swiss-Prot: 68% identical to GANP_BACSU: Putative arabinogalactan oligomer transport system permease protein GanP (ganP) from Bacillus subtilis (strain 168)

KEGG orthology group: K10109, maltose/maltodextrin transport system permease protein (inferred from 96% identity to enc:ECL_02646)

Predicted SEED Role

"Maltose/maltodextrin ABC transporter, permease protein MalF" in subsystem Maltose and Maltodextrin Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (434 amino acids)

>MPMX20_01676 hypothetical protein (Enterobacter sp. TBS_079)
MSIIPEHFAKPRVAGRHAWTSLLLAVIPGFGQFYHRQWLKGVIFLVLLASFIGVFADFLR
EGLWGLVTLGEEVPRDNSIFLLAEGIISVLIAAFGVMVYYLSMRDAWVNGLKRDEGLQLN
SVRKQYQMLLSDGFPYLMITPGFILLVFVVVFPILFGFAIAFTNYNLYHTPPAKLVDWVG
FKNFINIFTLSIWRSTFFDVLQWTVVWTLLATTLQCTVGVLLAILVNQKDLRFKPLIRTI
FILPWAVPGFVTILVFAGMFNDSFGVINNAILAFFGIAPKAWMTDPFWTKTALIMMQTWL
GFPFVFAMTTGVLQAIPDDLYEAATMDGASSWTRLRTITLPLVLYAIAPILITQYTFNFN
NFNIIYLFNNGGPAVVGSNAGGTDILVSWIYKLTMSSSQYAIAATITILLSVFVVGLALW
QFRATKSFKNDDMA