Protein Info for MPMX20_01673 in Enterobacter sp. TBS_079
Annotation: N-carbamoyl-L-amino acid hydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 41% identical to AMAB2_GEOSE: N-carbamoyl-L-amino acid hydrolase (amaB) from Geobacillus stearothermophilus
KEGG orthology group: K02083, allantoate deiminase [EC: 3.5.3.9] (inferred from 89% identity to enc:ECL_02649)Predicted SEED Role
"N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)" in subsystem Hydantoin metabolism (EC 3.5.1.87)
MetaCyc Pathways
- allantoin degradation to ureidoglycolate II (ammonia producing) (1/4 steps found)
- allantoin degradation to glyoxylate II (1/5 steps found)
- allantoin degradation to glyoxylate III (1/5 steps found)
- allantoin degradation IV (anaerobic) (3/9 steps found)
- superpathway of allantoin degradation in plants (2/8 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.1.87 or 3.5.3.9
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (413 amino acids)
>MPMX20_01673 N-carbamoyl-L-amino acid hydrolase (Enterobacter sp. TBS_079) MNHATRQQAAERVMARADALAAISETQDSLTRVYLSAQHLQANQLVGQWMNQAGMTVWQD SVGNICGRYEGEQEGAPAVLLGSHLDTVRNAGRYDGMLGVLTAIEVVDSLHQQGKRLAQA VEIVGFCDEEGTRFGITLLGSRALTGTWPVGWLDTCDARGISVAQAMVQAGLDPSRVAMA ARRPDDFSACLELHIEQGPCLEQAGLALGVVEAINGARRLNCRFTGEAGHAGTVPMAHRK DALAAAAEWMVLIENTTRQHGGNLVATVGELRCLPGAVNVIPGEVALSLDIRGPQDAPLD LLLTALLTQAQAIAARRGIHFAADEFYRIAATPCDTRLQALLAEAVESVQGKTLSLPSGA GHDTIALAERWPVGMLFVRCRGGVSHHPAESVMAEDVALAVDAFTRAVTRLAG