Protein Info for MPMX20_01268 in Enterobacter sp. TBS_079

Annotation: Methylthioribulose-1-phosphate dehydratase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 204 PF00596: Aldolase_II" amino acids 9 to 194 (186 residues), 145 bits, see alignment E=1.2e-46 TIGR03328: methylthioribulose-1-phosphate dehydratase" amino acids 10 to 199 (190 residues), 225.2 bits, see alignment E=2.5e-71

Best Hits

Swiss-Prot: 89% identical to MTNB_ENT38: Methylthioribulose-1-phosphate dehydratase (mtnB) from Enterobacter sp. (strain 638)

KEGG orthology group: K08964, methylthioribulose-1-phosphate dehydratase [EC: 4.2.1.109] (inferred from 89% identity to ent:Ent638_1143)

Predicted SEED Role

"Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)" in subsystem Methionine Salvage (EC 4.2.1.109)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.109

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (204 amino acids)

>MPMX20_01268 Methylthioribulose-1-phosphate dehydratase (Enterobacter sp. TBS_079)
MTDNLQLTHLVDACRWIGAKGWAPATGGNMSVRQDAHLCWLSESGKDKGSLTTDDFLQVE
IATNRAPSGRTPSAETGLHTLIYRLFPEANAVLHVHTVNATVLSRLVKEPELKITGFEMQ
KSLSGQSTHLDTVAIPVFDNDQDIDALAARIAEYAQKYPFNYGFLLRGHGLTCWGRNVAE
ARRHLEGLEFLFECEMRLRHWERV