Protein Info for MPMX20_00408 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 216 transmembrane" amino acids 12 to 31 (20 residues), see Phobius details amino acids 43 to 63 (21 residues), see Phobius details amino acids 71 to 93 (23 residues), see Phobius details amino acids 110 to 133 (24 residues), see Phobius details amino acids 145 to 167 (23 residues), see Phobius details amino acids 188 to 208 (21 residues), see Phobius details PF01914: MarC" amino acids 7 to 210 (204 residues), 169.1 bits, see alignment E=4.4e-54 TIGR00427: membrane protein, MarC family" amino acids 10 to 206 (197 residues), 106.1 bits, see alignment E=1e-34

Best Hits

KEGG orthology group: K05595, multiple antibiotic resistance protein (inferred from 67% identity to ebi:EbC_30580)

Predicted SEED Role

"Multiple antibiotic resistance protein MarC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (216 amino acids)

>MPMX20_00408 hypothetical protein (Enterobacter sp. TBS_079)
MFDLLKALSLGLIVLLPLANPLTTVALFLALTGGMTIATRNRIALLTSLNVFIIMMVTFY
AGQLVMNTFGISIPGLRIAGGLIVAFIGFRMLFPPSSRSDVSGTVPVNTGIAFVPLAMPS
TAGPGTIAMIISTASTSAARHGSEYAPWIIIVAPPLIFLSVSLLLWCSLRSSGTIMRLVG
TGGIDAISRLMGFLLVCTGVQFIINGTLELISLNHG