Protein Info for MPMX20_00244 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 245 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF20616: Caps_syn_GfcC_N" amino acids 20 to 140 (121 residues), 144.3 bits, see alignment E=2.6e-46 PF06251: Caps_syn_GfcC_C" amino acids 156 to 244 (89 residues), 135.5 bits, see alignment E=5.2e-44

Best Hits

Swiss-Prot: 66% identical to YJBG_ECOLI: Uncharacterized protein YjbG (yjbG) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 87% identity to enc:ECL_00280)

Predicted SEED Role

"YjbG polysaccharide synthesis-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (245 amino acids)

>MPMX20_00244 hypothetical protein (Enterobacter sp. TBS_079)
MKTLIRVALIASFATPLAWSAGTVKVYTQDNTKPKTLTNAGHLIDLVGQPRLANSWWPGA
VISERQATVVAEQQHNALLARLTGLAEQEEGDDAAAINSLRQQLKALKVTGRLPVNLDPD
HVRVAETANPSLEGEYTLWLPVQPSTITVFGLVSSPGDKPFMPGRDVASYLDEQNLLSGA
DKSYAWVVYPDGQTQKAPVAYWNKRHIEPMPGSVIFVGFADHFWTKAYDGLNADILHSLK
QRIPE