Protein Info for MMP_RS06350 in Methanococcus maripaludis S2
Annotation: HesA/MoeB/ThiF family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 40% identical to HESA1_ANAVT: Protein HesA, heterocyst (hesA1) from Anabaena variabilis (strain ATCC 29413 / PCC 7937)
KEGG orthology group: None (inferred from 100% identity to mmp:MMP1234)MetaCyc: 39% identical to sulfur carrier protein ThiS adenylyltransferase (Escherichia coli K-12 substr. MG1655)
RXN-9789 [EC: 2.7.7.73]
Predicted SEED Role
"Sulfur carrier protein adenylyltransferase ThiF" in subsystem Thiamin biosynthesis
MetaCyc Pathways
- superpathway of thiamine diphosphate biosynthesis I (5/10 steps found)
- superpathway of thiamine diphosphate biosynthesis II (5/11 steps found)
- thiazole component of thiamine diphosphate biosynthesis I (1/6 steps found)
- thiazole component of thiamine diphosphate biosynthesis II (1/7 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.7.73
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (archaea)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q6LXW2 at UniProt or InterPro
Protein Sequence (239 amino acids)
>MMP_RS06350 HesA/MoeB/ThiF family protein (Methanococcus maripaludis S2) MSLERYKRQILMDDFGELGQKKLLDATVTVVGVGGLGTVVSQYLAAAGVGNLKLVDYQEV ELSNLNRQILHFEKDIGIKKVISAKEKLESINSEINIEIYPEKVNENHIKNSDVIIDCLD NFEARYLLNNFSNKYKIPLVHGAIEDLRGQVTTIIPDETPCIECIFKLKDEEKNKSFPVL GVTPGVIGSIQAGEAIKLIIGIGTPLKNKLLSINMRTNDYFTFNIKKNPKCKICGGLND