Protein Info for MMP_RS06145 in Methanococcus maripaludis S2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1497 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mmp:MMP1193)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q6LY00 at UniProt or InterPro

Protein Sequence (1497 amino acids)

>MMP_RS06145 hypothetical protein (Methanococcus maripaludis S2)
VNKKSGQALFLVLVMVLSNMGGVMASDTTTLSDCTCNGGSGTIIIDCNCTDDRCFNVSIT
SPECASTWCDEVPITGTIVPCYNDDLGCADYVKVYYKKLSDYCCDCELYCECGNPAADNG
EGWILAGVDSTLEGECPAEWNLDWPICCEPDGCYVLRAVLYDACDLQVGCPSEPVYVCFD
KGVSVNLDLPESLSCGGVIGGCLNESCDCVDYILITAEYMGEGTCTPRCPVDECMPTMTY
IVDREDFESAMCCNYTFDVLFNNLYCGGVYVITATPYADCTDDCTYNGVQIGDEYVGCLE
IIREEVCFEIECPAPLSPECGMTLCGPITFSGILNDPCNAAQKIDFYAVKTGNFTLCDGA
CCPACNVCDGEIITLDAEEPRELAENICPNCGAEMDPIVCGSCGGIVTGYFCPDCGYPSN
EDLGDGISECICGIPEDHDNYINEKNLSDMVYLGSTSATMPDWTFTTNKFCDFNSGCYEV
YAVVDDKCECYDEFRYDTVEFAYCNERNLTIELEDCVYEECWMGNDCYRVYDIQSGTVTA
FGNITVPTCWIDYPDYVELEYDFGHKVQVDRCQWYIEWDNCWKDASCTDSSVTWTYEGAC
LKSGTWETDWCTPEDIEDEEGRYVRIRGVAEGGCGEFESEPIGTSIYNDFDIEIIDPCEG
NTIYNGKVIRGFVWVDADCCGWWCWPDTDDVCLPDHVDLYWREYGSENWLPMDSAFLNWK
NSEQYIDFTDYGIDPLYPNLPNFNWWDHYAYWDVTWSSCMVNCIDNGHYEIKAVVEPCEN
DECGDFERAEYVMDVYVDDTSGVSISKPIDGQTVCDNFWVYGTAVGAGVSNVDFYVSEDN
TSWTLYKEDIDVNVDDGRWKAPLNTCCFEDGPLYLKAVVTGPCDQSESNVMVNVNNAVEI
DLTCPDCCVYYVTGDKAPIRGTLTGCLVDERVESVKVYSASLGLLGEVPAEDFRYIGDGT
WEWGLCFNPCILNGASTQIYAEAEYSCGNTYTTITTGYECIQYDSNLVMVEITGPGAEPT
VAGTTTIEGTAECACLDYLEFEYRKICEPTGEPMGDWTNFPGVSVIYLPTTCDCEGMEWT
IDLNTCTMDGLYEIRVSAYGWPCQGAIASDTDMIDVDNNFGITLVTPAVNSGVKSGTIEV
GGTVENCPVIDTIELWYVDEGVPGMITDEITCSDGLWSYMFDTTTLEDGCYCLVAYAFDE
DCNNMEATETRAICINNSGIPPVINDTNTTVDRECVKILYACYEPCNTLKITFNDTVSIN
DSYDPASPLDGFDITDGSFGTGATMAESAINDHMIIITLGSSSNIITGTTEISIKTDQTA
ILGPHGFPIVDCSAELKGISEAAESTGSIEIENLKMFSVPGKVDTAQMVADSGITSGSFV
KFTDGQWELASGFEPLEGYVYIGTCEGSMPIYTVPLTATDTPPEIQLCCGWNLVGVNTYG
GSLDPVLCSDFTGGYPSITKVLEFSPSGWIKLNGGSQVIPTYAYWAYSDSECNFAGQ