Protein Info for MMP_RS03585 in Methanococcus maripaludis S2

Annotation: Hsp20/alpha crystallin family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 154 PF00011: HSP20" amino acids 56 to 153 (98 residues), 40.8 bits, see alignment E=9.9e-15

Best Hits

Swiss-Prot: 64% identical to HSPS_METJA: Small heat shock protein HSP16.5 (MJ0285) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

KEGG orthology group: None (inferred from 100% identity to mmp:MMP0684)

Predicted SEED Role

"Small heat shock protein HSP16.5"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q6LZE5 at UniProt or InterPro

Protein Sequence (154 amino acids)

>MMP_RS03585 Hsp20/alpha crystallin family protein (Methanococcus maripaludis S2)
MFGRDPKDPFSEIFKVFGMGVPMEGLGGPMGKSMFQMNSMGLEISGKGFMPITLIEGDET
IKIIALVPGINKDDIVINAIGETLELRAKRAPMAIMESEKIIYSEVPEDEEVYKTIKLPA
PVKEGNSSAKFENGMLIVTLPKAEKAKRTGIDIE