Protein Info for MMP_RS03095 in Methanococcus maripaludis S2
Annotation: diphthine synthase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to DPHB_METMP: Diphthine synthase (dphB) from Methanococcus maripaludis (strain S2 / LL)
KEGG orthology group: K00586, diphthine synthase [EC: 2.1.1.98] (inferred from 100% identity to mmp:MMP0588)MetaCyc: 51% identical to diphthine synthase monomer (Pyrococcus horikoshii)
Diphthine synthase. [EC: 2.1.1.98]
Predicted SEED Role
"Diphthine synthase (EC 2.1.1.98)" (EC 2.1.1.98)
MetaCyc Pathways
- diphthamide biosynthesis I (archaea) (1/3 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.1.1.98
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (archaea)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q6LZN6 at UniProt or InterPro
Protein Sequence (255 amino acids)
>MMP_RS03095 diphthine synthase (Methanococcus maripaludis S2) MLVMAGLGLYDERDVTLKTLDFAKKVDKIYAEFYTAILTGTTMEKIEGTLQKPITVLDRE KVEYETNKLIDEAKDKDIMFLTAGDPMVATTHVDIAVEARKKGIEVVIINAPSIYSAIGI TGLQLYKFGKTTSIVFPEPNYFPETPYDVIKDNLKLGYHTLCLLDIQADKERFMTANEGL DALLKIEEKRKENVISEETEVAVVARAGSINPGLYYGKIKDLLNYDFKSPLHCVIIPGKL HFMEEDALKYLFENI