Protein Info for MMP_RS02870 in Methanococcus maripaludis S2
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 100% identity to mmp:MMP0542)Predicted SEED Role
"Phosphoserine phosphatase (EC 3.1.3.3)" in subsystem Glycine and Serine Utilization or Serine Biosynthesis (EC 3.1.3.3)
MetaCyc Pathways
- L-serine biosynthesis I (3/3 steps found)
- superpathway of L-serine and glycine biosynthesis I (3/4 steps found)
- superpathway of sulfate assimilation and cysteine biosynthesis (4/9 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 3.1.3.3
Use Curated BLAST to search for 3.1.3.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (archaea)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q6LZT1 at UniProt or InterPro
Protein Sequence (200 amino acids)
>MMP_RS02870 hypothetical protein (Methanococcus maripaludis S2) MDYNTIKIKLDEINTQIKELYENAKELKEIRDRANDDVKKYKDLREDININVKDQIEEIR LLKQKRADMLAEFKSMKISKSYLAQKIEQLETTLETKPMSMDQEKDMIREIESHRKLYER AVELEDLNETIKTMSDGISVLVNQSSEEHKKVLENARVSAEKHQELLRTYAEINDLKAKA TELYDKLKEMKIKEIVEEEL