Protein Info for MMP_RS02555 in Methanococcus maripaludis S2

Annotation: AIPR family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 transmembrane" amino acids 469 to 481 (13 residues), see Phobius details amino acids 515 to 534 (20 residues), see Phobius details PF10592: AIPR" amino acids 255 to 555 (301 residues), 168.9 bits, see alignment E=1.1e-53

Best Hits

KEGG orthology group: None (inferred from 100% identity to mmp:MMP0481)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q6LZZ2 at UniProt or InterPro

Protein Sequence (650 amino acids)

>MMP_RS02555 AIPR family protein (Methanococcus maripaludis S2)
MLNADFYKVIDTELEKIIADPKNAEHFEKLKQPNQKKSHAFLIWFLNFYGEYYSVKNLIT
DGPNDNSCDIIFPRKNSFGEDVYYVVQSKWNTIGKIHEKNDSSDVKKALADFSTILEDGI
TKFPNNKFKDQYRKLMKHIRNNKEVRFIFLSLSEYNDDVNDVVSGFKTGNGTDILFLDIN
NIKKDYIEREYKDNSLNNPLEYYYDPYESEITLNIERFGNHDCIDLNDLDLHSYVFIITP
KTIHELFKKYRTGLFNKNVRNPLKNSEHNQKIEETLKTCPNRFWYYNNGITAITKNAGKL
NNKISQLITLNGLQVINGAQTVYSIYDAYDKANKSRREVLDKNVKILFRLIESSDEPLNL
EITRYTNSQNKILSSDFMANDEIQIRLQNESFNGTFWYERKRGEFVNNPEGVRIIDSRLI
ARDYITFHLQKLQDALYNYNNVFKSHKEDKNGIYEKIFNENTTFKDILISYLVSVLVRGS
LFRTYLKNTMNKTDQELLNLKDSDLNMTDRDIQELNHMLIPIIGLINPILIDYLSKKGKI
TNKNVSNYLLDLYEKDKHKFTDLILLSVVISLDRIYGDRETGKIHVNMDKIMNKECLYYF
TEKENIEKIGLTEKEISILDNPKKTEPNLDNILNKNESNDQDSGVPKSEL