Protein Info for MMJJ_RS08750 in Methanococcus maripaludis JJ

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 409 PF13439: Glyco_transf_4" amino acids 15 to 130 (116 residues), 36.7 bits, see alignment E=6.8e-13 PF00534: Glycos_transf_1" amino acids 242 to 389 (148 residues), 86.7 bits, see alignment E=2.1e-28 PF13692: Glyco_trans_1_4" amino acids 256 to 383 (128 residues), 65.1 bits, see alignment E=1.3e-21

Best Hits

KEGG orthology group: None (inferred from 72% identity to mfe:Mefer_0515)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (409 amino acids)

>MMJJ_RS08750 glycosyltransferase (Methanococcus maripaludis JJ)
MKFLFVAEYFPPYVMGGAEISLKILVDNLVKKGHEVVVLTPNYSSPKTKIDKKNNLKIIR
FGSFRHFLFKKREKTSHEVYKKTKPIFYTFLNHYVRYSTYELRKWVKKILKNEKFDVIHA
NNLESILAVGPINTSAKKIAHLRDFGLFCYNRGLNKSGGLCEGCSLNNLNACMGTEGTVN
KILEHEMKKRINKTSVLSSFDFLIAISNFVKEKYIDVLNVDKNKIKVIYNPISDDIVSKL
SKKEARSLLNLPENKKIVLYAGSLTEEKGAHMLSDLSEKLKEHLFIVIGNGVLKELFLKK
KQDNLIYLGYLSISELKDYYRAADILLVPSLWHEPFGRVVLEGAYNGCHVIGSDRGGIPE
VIDWLKCGIYTKPTVENFVKEITGYREDVLTEQKLEDYDYYEKFMELFE