Protein Info for MMJJ_RS08540 in Methanococcus maripaludis JJ

Annotation: archaeosortase family protein ArtE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 157 transmembrane" amino acids 12 to 40 (29 residues), see Phobius details amino acids 60 to 85 (26 residues), see Phobius details amino acids 94 to 121 (28 residues), see Phobius details amino acids 130 to 151 (22 residues), see Phobius details TIGR04124: archaeosortase family protein ArtE" amino acids 9 to 155 (147 residues), 156 bits, see alignment E=7.8e-50 PF09721: Exosortase_EpsH" amino acids 16 to 150 (135 residues), 50.7 bits, see alignment E=8.7e-18 TIGR04178: exosortase/archaeosortase family protein" amino acids 67 to 153 (87 residues), 53.8 bits, see alignment E=1.9e-18

Best Hits

KEGG orthology group: None (inferred from 96% identity to mmp:MMP1125)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (157 amino acids)

>MMJJ_RS08540 archaeosortase family protein ArtE (Methanococcus maripaludis JJ)
MNKKFNEYFLIILKYFSYSYIIYHILCHFESHLTNFIAYQSYLLLKLLLNDVILIQNLVY
LPNIIISITEPCTGMMLISILLAHILTVENRLKYYVFGSLFCILLIYLGNIFRIVIIGIL
ANTFGNGEYIHNTIGFVFFPTIAVFTILLWSKIKKRL