Protein Info for MMJJ_RS07850 in Methanococcus maripaludis JJ

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF09378: HAS-barrel
  • amino acids 5 to 89 (85 residues), 73.3 bits, E=2.1e-24
• PF01935: DUF87
  • amino acids 120 to 330 (211 residues), 178.8 bits, E=2.6e-56

Best Hits

Swiss-Prot: 57% identical to Y1565_METJA: Probable helicase MJ1565 (MJ1565) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

KEGG orthology group: K06915, (no description) (inferred from 99% identity to mmp:MMP1264)

Predicted SEED Role

"Bipolar DNA helicase HerA"

Protein Sequence (497 amino acids)

>MMJJ_RS07850 ATP-binding protein (Methanococcus maripaludis JJ)
MDNLMGYVIGETSNTELNFLAKHMPEIGSYVSINYCDLEILGMVESVNQGCKIFEDVYNV
KDFEKLKDFENNDSYYTIGKIKILGDVKNMQIPRIPPKPGTEVYNASEKILGEIFSKGTI
EIGNLISADSKVKLDVNKLCSRHLAILAITGMGKSNTVSVLLEELNNIHATVLVFDMHRE
YVEIEAKSSIIRRNIIKPKINVYNMSYDALMSLAGVDPQATVQRAMGRRAMKKIKESKKE
VDFNTVDEYINSIINELNYYMGMDEFKSKVDSILTLIMRFEDLMTFKDKITAINYNPIQD
IKENYVNIVDISELDESSTDLIISYFTGEILKDRKKVLWNTKVAKPIFIIYEEAHLIVPQ
NRPTKSKIPISKIAREGRKFGVGICLVSQRPKTLDQESLSQCNNFIISKLIEPSDQKHVQ
HASENLSEDLLNQLPGLNVGEAVIIGPCLKIPAMVKIKRFEGEYGGEDVKFDELWTTEKE
KNIPEFIESNELFNDDL