Protein Info for MMJJ_RS07660 in Methanococcus maripaludis JJ

Annotation: carbonic anhydrase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 PF00484: Pro_CA" amino acids 12 to 145 (134 residues), 60.6 bits, see alignment E=1.1e-20

Best Hits

KEGG orthology group: K01673, carbonic anhydrase [EC: 4.2.1.1] (inferred from 100% identity to mmp:MMP1299)

Predicted SEED Role

"Carbonic anhydrase (EC 4.2.1.1)" in subsystem Carboxysome or Cyanate hydrolysis (EC 4.2.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (150 amino acids)

>MMJJ_RS07660 carbonic anhydrase (Methanococcus maripaludis JJ)
MGENAKPKKKLAIVTCMDTRLVNFLSEKLGIAQGDAKVIKNAGNIITEDVIRSLVVAVYL
LGVEDIMIIGHTDCGMAAADFETVKKKMVERGANPNFTPDFEAWLGRMYCEETNVKEGVD
LLRNHPAMPKDITIDGYVMDIETGDLVKIA