Protein Info for MMJJ_RS06075 in Methanococcus maripaludis JJ

Annotation: DNA-binding protein Alba

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00285: DNA-binding protein Alba
  • amino acids 2 to 89 (88 residues), 138.2 bits, E=3.5e-45
• PF01918: Alba
  • amino acids 3 to 65 (63 residues), 72.7 bits, E=8.2e-25

Best Hits

Swiss-Prot: 98% identical to ALBA_METMP: DNA/RNA-binding protein Alba (albA) from Methanococcus maripaludis (strain S2 / LL)

KEGG orthology group: K03622, archaea-specific DNA-binding protein (inferred from 98% identity to mmp:MMP1613)

Predicted SEED Role

"DNA/RNA-binding protein Alba"

Protein Sequence (89 amino acids)

>MMJJ_RS06075 DNA-binding protein Alba (Methanococcus maripaludis JJ)
MDNIVYVGNKGVMNYVLAVITQFNSENAQEVIVKARGKAISRAVDVEEMVRKRFMPEIKI
KEINLGTDHIQGEDGKSINVSTIEIILFK