Protein Info for LRK55_RS15795 in Rhodanobacter denitrificans MT42

Annotation: homoserine O-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 369 transmembrane" amino acids 135 to 157 (23 residues), see Phobius details TIGR01392: homoserine O-acetyltransferase" amino acids 13 to 363 (351 residues), 360.4 bits, see alignment E=4.8e-112 PF00561: Abhydrolase_1" amino acids 42 to 350 (309 residues), 67.2 bits, see alignment E=9.1e-23

Best Hits

Swiss-Prot: 79% identical to SST_FRAAD: Serine O-succinyltransferase (Fraau_1049) from Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370)

KEGG orthology group: K00641, homoserine O-acetyltransferase [EC: 2.3.1.31] (inferred from 66% identity to sml:Smlt3277)

MetaCyc: 60% identical to serine O-acetyltransferase (Streptomyces lavendulae lavendulae)
Serine O-acetyltransferase. [EC: 2.3.1.30]

Predicted SEED Role

"Homoserine O-acetyltransferase (EC 2.3.1.31)" in subsystem Methionine Biosynthesis (EC 2.3.1.31)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.31

Use Curated BLAST to search for 2.3.1.30 or 2.3.1.31

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (369 amino acids)

>LRK55_RS15795 homoserine O-acetyltransferase (Rhodanobacter denitrificans MT42)
MGDARRYFALPSPFPMKRGGQLHGAHVAYETWGTLNAARDNAVLVLTGLSPSAHMTSCEE
DPSPGWWQEMAGPGKAIDTTRWFVICVNSLGSDKGSTCPASIDPATGEAYRLSFPELALE
DVASAAHAVVGSLGITRLACLIGCSMGGMSALAYMLLHPGSVRTHISVDTAPQAQPFAIA
IRSLQREAIRLDRHWNEGVYDDDNYPDIGMSIARKLGVITYRSAMEWNGRFARIRLDPEQ
REDEPFGREFQVESYLEGHARRFVRHFDPNSYLYLSRASDWFDIAEYGHGSVLEGLKRIH
IEQAMVIGVSTDILFPLQQQEQIAEGLEAAGARVEFVALDSPQGHDAFLVDIDNYSRAIG
GFLNRLPAS