Protein Info for LRK55_RS11585 in Rhodanobacter denitrificans MT42

Annotation: MoxR family ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 331 PF20030: bpMoxR" amino acids 18 to 185 (168 residues), 63.8 bits, see alignment E=3.7e-21 PF00493: MCM" amino acids 42 to 158 (117 residues), 24.8 bits, see alignment E=3.4e-09 PF07726: AAA_3" amino acids 46 to 176 (131 residues), 210.8 bits, see alignment E=1.6e-66 PF07728: AAA_5" amino acids 46 to 174 (129 residues), 50.9 bits, see alignment E=5.2e-17 PF00004: AAA" amino acids 48 to 181 (134 residues), 22.2 bits, see alignment E=5e-08 PF17863: AAA_lid_2" amino acids 259 to 323 (65 residues), 72.9 bits, see alignment E=4.5e-24

Best Hits

KEGG orthology group: K03924, MoxR-like ATPase [EC: 3.6.3.-] (inferred from 68% identity to psu:Psesu_0704)

Predicted SEED Role

"MoxR-like ATPase in aerotolerance operon"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.-

Use Curated BLAST to search for 3.6.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (331 amino acids)

>LRK55_RS11585 MoxR family ATPase (Rhodanobacter denitrificans MT42)
MDMPETPAPSRLQQSFAQLRDDLQQCIIGQPHLIDCLLVALLADGHLLVEGAPGLAKTTA
VKALAARIEADFHRVQFTPDLLPADLTGTDVFRPQSGSFEFERGPLFHNIVLADEINRAP
AKVQSALLEAMAEQQITVGRRTWPLPELFMVMATQNPIEQEGTFALPEAQLDRFLMHVTI
GYPDAVAELAILKLAREQASRRAHPVAKPPALLSQTDVFAARDAAMAVHMAPALEEYLTQ
LVLATRDAGRYGPELKRWIAWGGSPRATIALDRCSRAHAWLAGRDYVLPEDVHAIAHEVL
RHRVLLSYEAEAEGVRPDQVIARLLDLVPLP