Protein Info for LRK55_RS02070 in Rhodanobacter denitrificans MT42

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 187 PF13420: Acetyltransf_4" amino acids 2 to 152 (151 residues), 75.1 bits, see alignment E=1.7e-24 PF13302: Acetyltransf_3" amino acids 2 to 134 (133 residues), 25.5 bits, see alignment E=4.7e-09 PF13673: Acetyltransf_10" amino acids 23 to 138 (116 residues), 26.6 bits, see alignment E=1.3e-09 PF00583: Acetyltransf_1" amino acids 40 to 134 (95 residues), 48.8 bits, see alignment E=2.1e-16 PF13508: Acetyltransf_7" amino acids 51 to 135 (85 residues), 27.8 bits, see alignment E=6.9e-10

Best Hits

Swiss-Prot: 41% identical to PAT_STRVT: Phosphinothricin N-acetyltransferase (pat) from Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494)

KEGG orthology group: K03823, phosphinothricin acetyltransferase [EC: 2.3.1.183] (inferred from 50% identity to hoh:Hoch_4405)

Predicted SEED Role

No annotation

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.183

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (187 amino acids)

>LRK55_RS02070 GNAT family N-acetyltransferase (Rhodanobacter denitrificans MT42)
MIRTARDEDAAAIHAIYAPSVSAGVATFETELPSVETMRERLRARLQHYPWLVWEDAGEV
LAYAYAGRFRERAAYDWIAETSIYVRHDAQRRGIARRLYGVLLEVMRLQGITQAVGVITL
PGTASVAMHEAMGFAPAGVWRQCGYKLGQWWDVGVWQKELQPAATPPQPVTPFQALADTP
ALHALLG