Gene info for LRK54_RS05075 in Rhodanobacter denitrificans FW104-10B01

Annotation: non-homologous end-joining DNA ligase
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 1,088,587 to 1,089,435
See nucleotide sequence around LRK54_RS05075 or for all of scaffold NZ_CP088922

Nearby Genes

500 ntLRK54_RS05050 and LRK54_RS05055 are separated by 205 nucleotidesLRK54_RS05055 and LRK54_RS05060 are separated by 1 nucleotidesLRK54_RS05060 and LRK54_RS05065 overlap by 4 nucleotidesLRK54_RS05065 and LRK54_RS05070 are separated by 25 nucleotidesLRK54_RS05070 and LRK54_RS05075 are separated by 55 nucleotidesLRK54_RS05075 and LRK54_RS05080 are separated by 267 nucleotidesLRK54_RS05080 and LRK54_RS05085 are separated by 227 nucleotidesLRK54_RS05085 and LRK54_RS05090 are separated by 122 nucleotidesLRK54_RS05090 and LRK54_RS05095 are separated by 264 nucleotidesLRK54_RS05095 and LRK54_RS05100 overlap by 26 nucleotides LRK54_RS05050: LRK54_RS05050 - GH92 family glycosyl hydrolase, at 1,080,508 to 1,082,787 _RS05050 LRK54_RS05055: LRK54_RS05055 - L-fucose:H+ symporter permease, at 1,082,993 to 1,084,330 _RS05055 LRK54_RS05060: LRK54_RS05060 - carbohydrate kinase, at 1,084,332 to 1,085,312 _RS05060 LRK54_RS05065: LRK54_RS05065 - AGE family epimerase/isomerase, at 1,085,309 to 1,086,535 _RS05065 LRK54_RS05070: LRK54_RS05070 - M1 family metallopeptidase, at 1,086,561 to 1,088,531 _RS05070 LRK54_RS05075: LRK54_RS05075 - non-homologous end-joining DNA ligase, at 1,088,587 to 1,089,435 _RS05075 LRK54_RS05080: LRK54_RS05080 - ABC transporter ATP-binding protein/permease, at 1,089,703 to 1,091,469 _RS05080 LRK54_RS05085: LRK54_RS05085 - peroxiredoxin, at 1,091,697 to 1,092,308 _RS05085 LRK54_RS05090: LRK54_RS05090 - serine kinase, at 1,092,431 to 1,093,480 _RS05090 LRK54_RS05095: LRK54_RS05095 - B12-binding domain-containing radical SAM protein, at 1,093,745 to 1,095,247 _RS05095 LRK54_RS05100: LRK54_RS05100 - nucleotidyltransferase family protein, at 1,095,222 to 1,096,442 _RS05100
Locus Name Description Strand Phenotype
LRK54_RS05050 LRK54_RS05050 GH92 family glycosyl hydrolase - cofit
LRK54_RS05055 LRK54_RS05055 L-fucose:H+ symporter permease + strong
LRK54_RS05060 LRK54_RS05060 carbohydrate kinase + insig.
LRK54_RS05065 LRK54_RS05065 AGE family epimerase/isomerase + insig.
LRK54_RS05070 LRK54_RS05070 M1 family metallopeptidase + insig.
LRK54_RS05075 LRK54_RS05075 non-homologous end-joining DNA ligase - insig.
LRK54_RS05080 LRK54_RS05080 ABC transporter ATP-binding protein/permease - insig.
LRK54_RS05085 LRK54_RS05085 peroxiredoxin - insig.
LRK54_RS05090 LRK54_RS05090 serine kinase - insig.
LRK54_RS05095 LRK54_RS05095 B12-binding domain-containing radical SAM protein + insig.
LRK54_RS05100 LRK54_RS05100 nucleotidyltransferase family protein + insig.

Or browse nearby genes