Protein Info for IAI47_21845 in Pantoea sp. MT58
Annotation: cytochrome P450
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 50% identical to C1332_XYLFT: Putative cytochrome P450 133B2 (cyp133B2) from Xylella fastidiosa (strain Temecula1 / ATCC 700964)
KEGG orthology group: None (inferred from 88% identity to pva:Pvag_pPag10151)Predicted SEED Role
"putative cytochrome P450 hydroxylase" in subsystem Nitric oxide synthase
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (396 amino acids)
>IAI47_21845 cytochrome P450 (Pantoea sp. MT58) MQLQELMNPDYSDNPFPLYRKLHQQGPLIPAGDKIIISGSHAVVEALLNDRRVGKNYMES VRLRFGDDAADMPLFQGISRMFLVLNPPEHSRLKGLVMKSFSAREIKPLREMALTVANEL VDALADRRACDLAQAFAFPLPVRIICRMLDISESDAPELGRLTSVLVKVFDPQISQADLL EAADAFAVLERYFSALIVSRRDSTANDLVSLFLRSGSEDDRLSHDEIIANVVLLFLAGHE TTSNMICNTILALHDHPQELACLKRNPALITNAIEECLRYDSSVQMLYRTTLEEIELAGQ LIPTGTRFFLSLGAANHDPRVFTSPERVNIRRHEGRCLAFGGGIHHCMGYRLALAEMEVA LHVLLTRLPELRPITAGVRRNHRANLRGVNALPVEW