Protein Info for IAI47_21840 in Pantoea sp. MT58

Annotation: chorismate mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 181 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details TIGR01806: putative chorismate mutase" amino acids 24 to 136 (113 residues), 137.2 bits, see alignment E=1.3e-44 PF01817: CM_2" amino acids 33 to 99 (67 residues), 54.3 bits, see alignment E=7.1e-19

Best Hits

Swiss-Prot: 87% identical to CHMU_ENTAG: Monofunctional chorismate mutase (aroQ) from Enterobacter agglomerans

KEGG orthology group: None (inferred from 83% identity to pva:Pvag_pPag10150)

Predicted SEED Role

"Periplasmic chorismate mutase I precursor (EC 5.4.99.5)" in subsystem Chorismate Synthesis or Phenylalanine and Tyrosine Branches from Chorismate (EC 5.4.99.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 5.4.99.5

Use Curated BLAST to search for 5.4.99.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (181 amino acids)

>IAI47_21840 chorismate mutase (Pantoea sp. MT58)
MTHFVAIFFSSLFMCSNVFAGSVSSVSMSALSGALNERMQVMKVVAGYKAQHHLPIEDLP
REQVVLDHMLQNAEQAGLEPHSVEPFVHALMNASKAVQYRYRADWLSVPDSDRPIPDLAE
TRQQIEKLDTQLLTAISQRLMTGIFSQEDKAFLMSQLTAPHLSQQDKNSLFASLGRIKRL
R