Protein Info for IAI47_20855 in Pantoea sp. MT58

Annotation: alkene reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 363 PF00724: Oxidored_FMN" amino acids 6 to 335 (330 residues), 281.1 bits, see alignment E=7.2e-88

Best Hits

Swiss-Prot: 46% identical to OPR1_SOLLC: 12-oxophytodienoate reductase 1 (OPR1) from Solanum lycopersicum

KEGG orthology group: K10680, N-ethylmaleimide reductase [EC: 1.-.-.-] (inferred from 89% identity to rah:Rahaq_1902)

MetaCyc: 58% identical to nitroglycerin reductase (Agrobacterium tumefaciens)
1.7.1.-; 1.7.1.-

Predicted SEED Role

"NADH:flavin oxidoreductase/NADH oxidase family protein"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.-.-.-

Use Curated BLAST to search for 1.-.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (363 amino acids)

>IAI47_20855 alkene reductase (Pantoea sp. MT58)
MTNDALFQTYELGSITLANRIVMAPLTRNRAEAGLVPGELAATYYAQRATAGLLITEATQ
ISEQAQGYQDTPGIYTQAQIDGWRKVTDAVHAKGGRIFVQLWHVGRISHVDLQPGGAAPV
APSAIRAETKTFVNNGFADVSEPRSLELHEINGIVADFKKASANAIAAGFDGVEIHGANG
YLLEQFLKDGANQRTDEYGGSVENRARLLLEVVQAVKDEIGAERTGVRISPVSPANAISC
SDPQPQYDYVADQLNASGIAYLHVVEGVTGGPRDATAFDYTSLRRRFRNTYIANNGYDLA
LASEHLAQDKADLFAFGRPFISNPDLVERLKTGAPLAPLNPETLYGGGAQGYTDYPSLND
TSE