Protein Info for IAI47_20805 in Pantoea sp. MT58

Annotation: ornithine cyclodeaminase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02423: OCD_Mu_crystall
  • amino acids 5 to 310 (306 residues), 182.9 bits, E=7.7e-58
• PF01488: Shikimate_DH
  • amino acids 117 to 212 (96 residues), 25.3 bits, E=1.4e-09

Best Hits

KEGG orthology group: K01750, ornithine cyclodeaminase [EC: 4.3.1.12] (inferred from 70% identity to epy:EpC_14320)

Predicted SEED Role

"Ornithine cyclodeaminase (EC 4.3.1.12)" in subsystem Arginine and Ornithine Degradation (EC 4.3.1.12)

MetaCyc Pathways

• L-ornithine degradation I (L-proline biosynthesis) (1/1 steps found)
• L-arginine degradation VII (arginase 3 pathway) (1/2 steps found)
• L-proline biosynthesis II (from arginine) (1/2 steps found)

KEGG Metabolic Maps

• Arginine and proline metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.3.1.12

Protein Sequence (323 amino acids)

>IAI47_20805 ornithine cyclodeaminase family protein (Pantoea sp. MT58)
MQFIHREQVEQILSSATCLQLSREAFTLMSRGKVKQTLRSVIASEQGSLMGTMPAYIEDG
PYAGFGLKTVRVDFNHHNQSTSHEGCILLYDATDEGDIVLVDAASVTELRTAAASALATD
LLAHQNASHLAILGTGVQARKHVQMIMAVRAITYISVWGRSRAGAAQFAAWCQHYSGLPV
TVAETPAQAIAQADIICTVTAAKAPFLRASDLPARCHINAVGASAPGFQEVAPDIYTAVN
LYLDSREAVWNASSCLLKAKQQGLLLQDASGTEIGTLLTSGDRPDLPVSQRTLFKSVGLA
VQDLVFARAIVAGSRSAMNNTLK