Protein Info for IAI47_20455 in Pantoea sp. MT58

Annotation: sugar porter family MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 480 transmembrane" amino acids 27 to 52 (26 residues), see Phobius details amino acids 61 to 82 (22 residues), see Phobius details amino acids 94 to 112 (19 residues), see Phobius details amino acids 119 to 140 (22 residues), see Phobius details amino acids 152 to 172 (21 residues), see Phobius details amino acids 185 to 205 (21 residues), see Phobius details amino acids 263 to 287 (25 residues), see Phobius details amino acids 303 to 327 (25 residues), see Phobius details amino acids 334 to 357 (24 residues), see Phobius details amino acids 369 to 394 (26 residues), see Phobius details amino acids 406 to 426 (21 residues), see Phobius details amino acids 432 to 454 (23 residues), see Phobius details TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 11 to 468 (458 residues), 392.6 bits, see alignment E=1.3e-121 PF00083: Sugar_tr" amino acids 29 to 472 (444 residues), 384.5 bits, see alignment E=1.1e-118 PF07690: MFS_1" amino acids 34 to 382 (349 residues), 121 bits, see alignment E=8.6e-39 PF06609: TRI12" amino acids 66 to 227 (162 residues), 32.2 bits, see alignment E=6.3e-12

Best Hits

Swiss-Prot: 51% identical to YFIG_BACSU: Putative metabolite transport protein YfiG (yfiG) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 98% identity to pva:Pvag_pPag30221)

Predicted SEED Role

"Major myo-inositol transporter IolT" in subsystem Inositol catabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (480 amino acids)

>IAI47_20455 sugar porter family MFS transporter (Pantoea sp. MT58)
MEKELYISSNPASGPNSATRTEPFVKIIALVATLGGLLFGYDTGVVSGALLFMRGDLHLT
PFTTGLVTSSLLFGAAFGALAAGHLADGLGRRRIIIALALIFALGAVGSALAPDVTWMIA
SRLFLGFAVGGAAATVPVYIAEIAPANKRGQLVTLQELMIVSGQLLAYISNATFNDIWGG
ENTWRWMLALSIVPAVLLWIGMIFMPETPRWHVMKGRSQAAREVLEKTRAAEDVEWELEE
IEETIEENRQRGKGRLRDLATPWLMKIFLLGVGIAAIQQLTGVNTIMYYAPTMLTAAGLS
NDAALFATIANGVISVVMTLVGIWLIGKVGRRPLVLIGQMGCTCCLFFIGLVCWLMPEYL
NGTVNLLRAYLVLAGMLMFLCFQQGALSPVTWLLLSEIFPARMRGICMGGAVFSLWIANF
AISMAFPLLLAAFGLAGAFFIFAAIGIGGSFFVVKFIPETRGRSLEQVEHYFYALYNVKK