Protein Info for IAI47_19545 in Pantoea sp. MT58

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 41 to 62 (22 residues), see Phobius details amino acids 71 to 89 (19 residues), see Phobius details amino acids 101 to 122 (22 residues), see Phobius details amino acids 136 to 155 (20 residues), see Phobius details amino acids 161 to 180 (20 residues), see Phobius details amino acids 212 to 231 (20 residues), see Phobius details amino acids 251 to 271 (21 residues), see Phobius details amino acids 282 to 302 (21 residues), see Phobius details amino acids 308 to 333 (26 residues), see Phobius details amino acids 345 to 365 (21 residues), see Phobius details amino acids 371 to 389 (19 residues), see Phobius details PF07690: MFS_1" amino acids 9 to 339 (331 residues), 96.8 bits, see alignment E=1.2e-31 PF12832: MFS_1_like" amino acids 14 to 375 (362 residues), 59.7 bits, see alignment E=2.7e-20

Best Hits

KEGG orthology group: None (inferred from 96% identity to pva:Pvag_pPag30452)

Predicted SEED Role

"MFS transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (400 amino acids)

>IAI47_19545 MFS transporter (Pantoea sp. MT58)
MSQRSLYALCLMSFFLADVRDGLGPFLGIFLTERHWRPDEIGLVMTCGGIAGLLATLPAG
IAADATRHKKMIVLLGCLVITVATLLLWYSNQTWTAMVSQIVAGIAAAFIGPTVAGITLG
LTGQRGFNHQMGRNEAFNHGGNTIAALLAGFSAWYWGMGAVFILMTVMAVFAAFATLAIR
GDEIDNDVARGYEKQEERQPALNLSMLIRKPALMIAGVTLLLFHLANAALLPMLSMRVAS
AGGQAAVSPGLYAAATVVISQLVMIPVALWVSKRVETQGYRLFIMVALMILPLRAVIAAG
FAEPIFVIPVQVLDGIAAGILGVAVPGYIVTLMRGTGHVNAGQSVIMLMQGVGAALSPAM
TGMIAARYSYSTAFAVLGAIALAALILWWRTGSSHATRLA