Protein Info for IAI47_18595 in Pantoea sp. MT58

Annotation: endoglucanase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

Best Hits

Swiss-Prot: 58% identical to GUNY_DICD3: Minor endoglucanase Y (celY) from Dickeya dadantii (strain 3937)

KEGG orthology group: K01179, endoglucanase [EC: 3.2.1.4] (inferred from 97% identity to pva:Pvag_3358)

Predicted SEED Role

"Endoglucanase precursor (EC 3.2.1.4)" (EC 3.2.1.4)

MetaCyc Pathways

cellulose degradation II (fungi) (2/3 steps found)

KEGG Metabolic Maps

Starch and sucrose metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (335 amino acids)

>IAI47_18595 endoglucanase (Pantoea sp. MT58)
MKRKPFWMGWICSVLLLTCSAQASASGWDTFKGRFLTAEGRITDTANNNVSHTEGQGYGM
LLAVANNDRATFDRLWQWTRTQLGNPQTDLFYWRYVPGSDNPVADKNNASDGDVLLAWAL
QRAAQKWQVESYQQASDRIQRAIIKLDVTNFGGYTVLLPGAQGFNKTSYVVLNPSYFLFQ
AWREFGERSHLQVWDKLINDGFTLLGKLRFGKTGLPLDWVALNADGSVAPAVGYSNRFSY
DAIRVPLNIWWYDPHSLALVPFQRVWQGYSRMLTPAWFDVLANAPAPYHLEGGLLAVRDL
TLNETGHLSDKLAADQNYFSASLQLLTWQAFQEKR