Protein Info for IAI47_17650 in Pantoea sp. MT58

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 469 transmembrane" amino acids 33 to 50 (18 residues), see Phobius details amino acids 57 to 77 (21 residues), see Phobius details amino acids 83 to 103 (21 residues), see Phobius details amino acids 110 to 128 (19 residues), see Phobius details amino acids 135 to 157 (23 residues), see Phobius details amino acids 169 to 190 (22 residues), see Phobius details amino acids 202 to 219 (18 residues), see Phobius details amino acids 286 to 307 (22 residues), see Phobius details amino acids 320 to 339 (20 residues), see Phobius details amino acids 349 to 367 (19 residues), see Phobius details amino acids 373 to 394 (22 residues), see Phobius details amino acids 411 to 433 (23 residues), see Phobius details amino acids 439 to 458 (20 residues), see Phobius details PF00083: Sugar_tr" amino acids 39 to 469 (431 residues), 118.7 bits, see alignment E=3.3e-38 PF07690: MFS_1" amino acids 81 to 327 (247 residues), 73.5 bits, see alignment E=1.6e-24 amino acids 289 to 452 (164 residues), 50.8 bits, see alignment E=1.2e-17

Best Hits

KEGG orthology group: K08369, MFS transporter, putative metabolite:H+ symporter (inferred from 97% identity to pva:Pvag_3562)

Predicted SEED Role

"Transporter, MFS superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (469 amino acids)

>IAI47_17650 MFS transporter (Pantoea sp. MT58)
MTTTSTSLPPLHASSAARNSLAARVDALPSSTGLWRFITLLALGGFFELYDLFETGYIST
GLLSAGVFHTGAAGVLGFSDQAAFASATFLGLFFGASLLAPYADRFGRRLTFMCALLWYG
LFSLLMAFQQSAEMIILFRFLVGIGLGVELVTIDTYLSEWVPTHLRSRAFAFSFFVQFLS
VPAVALMSWWLIPQTLLSLEGWRWVVIAGAVCSLVIWLVRRNLPESARWLAQQGRHQEAH
QVLSTMEQRCGIPAGPAVQPDDAAGQLPKRGRFSEIWSPAYRKRTLMLVVMNFFQAIGFF
GFGNWLPALLSGNGATVTHSLLYAFFITLAYPLGSLICSRYADKLENKWQIVLSSLMTVV
FGTLFAFQTQPVLLILCGFLITWSNAWLTFSFHAYQTEIFPTHIRARAVGFCYSFSRLST
VFSSILIGVILQYAGTPGVITFIVLSMVMVMLSVGIYGPKTRGIDLENI