Protein Info for IAI47_16480 in Pantoea sp. MT58

Annotation: YecA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 222 TIGR02292: yecA family protein" amino acids 10 to 182 (173 residues), 158.1 bits, see alignment E=9e-51 PF03695: UPF0149" amino acids 12 to 182 (171 residues), 124.5 bits, see alignment E=6e-40 PF02810: SEC-C" amino acids 204 to 221 (18 residues), 40.6 bits, see alignment (E = 1.8e-14)

Best Hits

Swiss-Prot: 65% identical to YECA_SHIFL: Uncharacterized protein YecA (yecA) from Shigella flexneri

KEGG orthology group: K07039, uncharacterized protein (inferred from 98% identity to pva:Pvag_0001)

Predicted SEED Role

"FIG00554062: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (222 amino acids)

>IAI47_16480 YecA family protein (Pantoea sp. MT58)
MKEGPLSEKELQWLEDMLEKYGSEASIIDVSELDGLLTAVLSGPTTVEPSQWLVALWGGE
KQIPKWSNEREMTRFMSLCFQHMNDVADRLSEFPEQFEPLFGIREMEGLEFTVVEEWCFG
YMRGVALTDWSALPADLQPALDAIALHGVEENLDKIDAMTPDEMEASIEAIRPAALALHD
HWISQPEAIPVPQKPVAAEKLPGRNDPCPCGSGKKYKQCCLH