Protein Info for IAI47_15115 in Pantoea sp. MT58
Annotation: glutamate-5-semialdehyde dehydrogenase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 81% identical to PROA_ERWT9: Gamma-glutamyl phosphate reductase (proA) from Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)
KEGG orthology group: K00147, glutamate-5-semialdehyde dehydrogenase [EC: 1.2.1.41] (inferred from 98% identity to pva:Pvag_0283)MetaCyc: 74% identical to glutamate-5-semialdehyde dehydrogenase (Escherichia coli K-12 substr. MG1655)
Glutamate-5-semialdehyde dehydrogenase. [EC: 1.2.1.41]
Predicted SEED Role
"Gamma-glutamyl phosphate reductase (EC 1.2.1.41)" in subsystem Proline Synthesis (EC 1.2.1.41)
MetaCyc Pathways
- L-proline biosynthesis I (from L-glutamate) (4/4 steps found)
- L-ornithine biosynthesis II (2/3 steps found)
- L-citrulline biosynthesis (5/8 steps found)
- superpathway of L-citrulline metabolism (7/12 steps found)
- L-Nδ-acetylornithine biosynthesis (3/7 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.2.1.41
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (417 amino acids)
>IAI47_15115 glutamate-5-semialdehyde dehydrogenase (Pantoea sp. MT58) MLEEMGKAARAAAYTVADLSTAEKNDVLMTIADRLEAESADILAANELDLADARQNGMSA ALLDRLTLNPQRLSSIASDVRQVCQLADPVGQLIDGGQLDSGLRIERRRVPLGVVAVIYE ARPNVTVDVASLCLKTGNAAILRGGKETWRTNAATVRVIQNALKQHGLPVAIVQAIENPD RELVNQLLKLDRYVDMLIPRGGAGLHKLCRENSTIPVITGGIGVCHIYIDETMEIEPALD VIVNAKKQRPSACNSLETLLVDQAMAERFLPAFSARMAQEGIALHADSNVLAQLQHGPAP VKPVNPQQYNDEWLSLDLNVKLVADMDEAIDHIRTHGTQHSDAILTRNTRNAARFVRQVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIAWGDDTLRP