Protein Info for IAI47_14620 in Pantoea sp. MT58
Annotation: 7-cyano-7-deazaguanine synthase QueC
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 84% identical to QUEC_CITK8: 7-cyano-7-deazaguanine synthase (queC) from Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
KEGG orthology group: K06920, queuosine biosynthesis protein QueC (inferred from 95% identity to pva:Pvag_0384)MetaCyc: 84% identical to 7-cyano-7-deazaguanine synthase (Escherichia coli K-12 substr. MG1655)
RXN-12093 [EC: 6.3.4.20]
Predicted SEED Role
"Queuosine Biosynthesis QueC ATPase" in subsystem Queuosine-Archaeosine Biosynthesis
MetaCyc Pathways
- preQ0 biosynthesis (3/4 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 6.3.4.20
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (231 amino acids)
>IAI47_14620 7-cyano-7-deazaguanine synthase QueC (Pantoea sp. MT58) MKRAVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHREEIEVARDLASKLGARAHKV LDVTMLNELAVSSLTRDNIPVPAYNPEASGLPSTFVPGRNILFLTLASVYAYQVEAEAVI TGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALADYWQQLSL VREQTLTCYNGVKGDGCGECAACNLRANGLQGYLNDRDSVMAAMKAKSGLS