Protein Info for IAI47_14480 in Pantoea sp. MT58

Annotation: adenine phosphoribosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 183 transmembrane" amino acids 67 to 85 (19 residues), see Phobius details TIGR01090: adenine phosphoribosyltransferase" amino acids 11 to 179 (169 residues), 235.3 bits, see alignment E=2.1e-74 PF00156: Pribosyltran" amino acids 31 to 153 (123 residues), 48.6 bits, see alignment E=3e-17

Best Hits

Swiss-Prot: 88% identical to APT_ERWT9: Adenine phosphoribosyltransferase (apt) from Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)

KEGG orthology group: K00759, adenine phosphoribosyltransferase [EC: 2.4.2.7] (inferred from 99% identity to pva:Pvag_0410)

MetaCyc: 86% identical to adenine phosphoribosyltransferase (Escherichia coli K-12 substr. MG1655)
Adenine phosphoribosyltransferase. [EC: 2.4.2.7]

Predicted SEED Role

"Adenine phosphoribosyltransferase (EC 2.4.2.7)" in subsystem Purine conversions or cAMP signaling in bacteria (EC 2.4.2.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.2.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (183 amino acids)

>IAI47_14480 adenine phosphoribosyltransferase (Pantoea sp. MT58)
MTDTAQQLEFIKNSIKSIPDYPKPGILFRDVTSLLEDPKAYAASIALLVERYRNKGITKV
VGTEARGFLFGAPVALGLGVGFVPVRKPGKLPREVYSEAYELEYGTDQLELHKDAIQPGD
LVLVVDDLLATGGTIEATVKLIRRAGGEVKDAAFIINLFDLTGESRLNALGVESYSLVKF
PGH