Protein Info for IAI47_14140 in Pantoea sp. MT58

Annotation: NAD(P)-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1252 PF13692: Glyco_trans_1_4" amino acids 602 to 713 (112 residues), 36.6 bits, see alignment E=8e-13 PF13450: NAD_binding_8" amino acids 788 to 848 (61 residues), 43 bits, see alignment 6.7e-15 PF01593: Amino_oxidase" amino acids 807 to 1241 (435 residues), 41.7 bits, see alignment E=1.5e-14

Best Hits

KEGG orthology group: None (inferred from 94% identity to pva:Pvag_0462)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1252 amino acids)

>IAI47_14140 NAD(P)-binding protein (Pantoea sp. MT58)
MTPFTSFWQAGYEGADHINPAGIALSMNDLNQHQARVAEDYAALSPFSIRTVRESVGWRL
CERDGHYDFSTVAARMRAAEQQGIQLSWTICHYGWPAGVSLFDHDFISRFAAFCGALARF
LAPWYQQPPVYSPMNEISFVSWGISVGLFACEAIPAPDRADAAKQQLVRATLAACDAIWL
ADPRARLLHCDPLIHIVPDPADPTSDVLAREMCDTQYQAWDMLSGRRNPELGGTPRYLDL
IGVNYYHDNQWEQGSNLRLYWHLGDNRRQPLHQMLQQVWQRYQRPILLAETSHVGSGRGA
WISEITAQVAQAQLAGVDLIGICLYPILDRPLWEETTFWTRSGLWDLDLLGPDPYARQLQ
QPYADALRQAQRFLQHIQSPLQRQEHTMKPPVLIVFSHLRWGFVFQRPQQLLTRLAQHYR
VLFFEEPVRQSGPPGLHQSSPAANITVIQPHTDSDAPGFHDSQIAPLLLLLAPLLEEDEQ
PLIWFYTPMALPLLTPFDPSLVIYDCMDELSAFQNAPRQLQQRESALMTRADLVFTGGTS
LYEAKRDKHSQVYCFPSSVDAVHFEQARDRTNRHPLQDTIPPQRLGYYGVLDERIDLSLI
ATLADTHPEWQIIMVGPVVKIDPASLPQRDNIHWLGQQPYQALPQFLAGWDVCLMPFAIN
ASTRFISPTKVLEYMAAQLPIVSTAIVDVARHYAEEVAVAETHPAFIAACEQAMAMGAAE
RLALMGRMQTKVDATSWDRTAEQIHGLIQQALAQRQPALKSASQASAQANVTPLTPAMLE
SEAVPCLIIGAGPTGLSAGYHYGEGAVLLEKNSTPGGWCRSIDDQGFTFDYAGHIMFSQD
PYVLQLYEMLLGDNLHWQAREAWVYSDGVYTRYPFQSALHGLPVEVVKECVLGAIEARYG
ATATAAVPLDRARARRDCCADGAIPDEGSSSGMVEGEEDFQHFIMRTWGKGIARHFALPY
NQKLWKVPLSDMETSWLGGRVPLPDLSQIIDGALQPLAKPVGPNARFGYPLRGGFQALMS
GFLPHLKCTLETDTTLTRIYSQAHVALLADGRHYRYEQLISTMPLPELIKLMGDEVPESV
QRAAQQLQFVSVRCVNLGIGRADLTEKHWIYYPGDTLFHRIFVQGNASPHCNPPGGFGLT
CEITYNAANPLPLEGDALIERCRQDCIRVGMITADDPLLCASEVDMPYAYVVYDHARSDN
VALIRQWLLTQDIHLSGRYSEWEYYNSDHAFLAGKRAAENVRLQHVRAGTVG