Protein Info for IAI47_13175 in Pantoea sp. MT58

Annotation: anion permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 369 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 39 to 58 (20 residues), see Phobius details amino acids 79 to 107 (29 residues), see Phobius details amino acids 119 to 139 (21 residues), see Phobius details amino acids 155 to 180 (26 residues), see Phobius details amino acids 200 to 218 (19 residues), see Phobius details amino acids 220 to 240 (21 residues), see Phobius details amino acids 245 to 265 (21 residues), see Phobius details amino acids 282 to 303 (22 residues), see Phobius details amino acids 311 to 334 (24 residues), see Phobius details amino acids 343 to 365 (23 residues), see Phobius details PF00939: Na_sulph_symp" amino acids 19 to 167 (149 residues), 29.6 bits, see alignment E=4e-11 PF03600: CitMHS" amino acids 23 to 303 (281 residues), 134.2 bits, see alignment E=5.9e-43

Best Hits

Swiss-Prot: 57% identical to YBIR_ECOLI: Inner membrane protein YbiR (ybiR) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 97% identity to pva:Pvag_0666)

Predicted SEED Role

"Putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (369 amino acids)

>IAI47_13175 anion permease (Pantoea sp. MT58)
MPQLLRSFLHDSILHLLIVIGVVLAFLADFRWADLPGAVDWHTIITLTGLLILTKGLETS
GYFDVLGGRLIARFRHERALALFMVLAAALLSTFLTNDVALFILVPLTLTLRKFSHLPIS
RLIIFEALAVNAGSLLTPVGNPQNILLWSHGKLSVIAFIVQMLPLAAWLLLSLVVLTWFS
FSKRTIDKHDNPEQPEWQKPLFIVSVVLYLLFIAGLELEITGWILLVILATFMVMARPVL
QRIDWSLLAVFIAMFIDVFLLTRLPVMQAHFDAVAHFGQGQLYLLAIGLSQVISNVPATI
LLLQKVPPTDVLAWAVNIGGFGLLPGSLANLIALRMAKDRAVWWQFHLFSLPLLAWSMAS
GWLLLRLLN