Protein Info for IAI47_12790 in Pantoea sp. MT58

Annotation: chromosome partition protein MukE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 241 PF04288: MukE" amino acids 10 to 225 (216 residues), 409.9 bits, see alignment E=9.8e-128

Best Hits

Swiss-Prot: 88% identical to MUKE_ECOLI: Chromosome partition protein MukE (mukE) from Escherichia coli (strain K12)

KEGG orthology group: K03804, chromosome partition protein MukE (inferred from 97% identity to pva:Pvag_0749)

Predicted SEED Role

"Chromosome partition protein MukE" in subsystem DNA structural proteins, bacterial or MukBEF Chromosome Condensation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (241 amino acids)

>IAI47_12790 chromosome partition protein MukE (Pantoea sp. MT58)
MSSTNIEQVMPVKLAQALANPIFPALDSQLRAGRHIGIEELDNHAFLMDYQSFLEEFYSR
YHVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQEL
YDELLSLADENRLLKLVNQRSTGSDLDRTKLQEKVRASLSRLRRLGMVWFYGNDSSKFRI
TESVFRFGADVRSGDDAREAQLRLIRDGEAMLLENATAPVDTDEGDGQEGDASENAEEEQ
A