Protein Info for IAI47_12000 in Pantoea sp. MT58
Annotation: thiamine kinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K07251, thiamine kinase [EC: 2.7.1.89] (inferred from 84% identity to pva:Pvag_0908)Predicted SEED Role
"Thiamine kinase (EC 2.7.1.89) @ Adenosylcobinamide kinase (EC 2.7.1.156)" (EC 2.7.1.156, EC 2.7.1.89)
MetaCyc Pathways
- thiamine diphosphate salvage I (2/2 steps found)
- adenosylcobinamide-GDP salvage from cobinamide I (4/5 steps found)
- superpathway of adenosylcobalamin salvage from cobinamide I (4/8 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.1.156 or 2.7.1.89
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (260 amino acids)
>IAI47_12000 thiamine kinase (Pantoea sp. MT58) MIEQVTGEPDKALIMPLAGLTGHSQKIVSPSGTFIVRATPQPAIPFVDRQREFRLLRKLR TTGLAPQPVASHPQGIILTWCAGEALDAQRFGEQRPQIVALLKQLHQQPLTGYQLSMLSL LWDYWQLTPQRHHRWLRALRRLTQQGEPRPLRLAPLHMDLHAGNVIQGPEGLRLIDWEYA ADGDVALELAAVCASDPQHDADWLAEYAAAMQLPLPALVQQVRRWQPWLRLLMASWYQLR ASQSENETLHQLARQSWEQI