Protein Info for IAI47_10440 in Pantoea sp. MT58

Annotation: DUF2569 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 147 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 56 to 80 (25 residues), see Phobius details amino acids 91 to 110 (20 residues), see Phobius details amino acids 116 to 134 (19 residues), see Phobius details PF10754: DUF2569" amino acids 9 to 145 (137 residues), 134.3 bits, see alignment E=2.2e-43

Best Hits

KEGG orthology group: None (inferred from 95% identity to pva:Pvag_1242)

Predicted SEED Role

"Putative inner membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (147 amino acids)

>IAI47_10440 DUF2569 domain-containing protein (Pantoea sp. MT58)
MNEQVAAPRIGGWLLLPLAWLIMTLLTTVLVLAMYLTPLFNPAWRVALFSHGSTLFSYWA
ISLLTAVAVWAYSLWISWLFLKRSRRLPRHYLLWLLITVLLALKTFAFTPVADSRALQTL
LLSLLAAAVFVPYFKRSERVKKTFIAP