Protein Info for IAI47_10045 in Pantoea sp. MT58

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 transmembrane" amino acids 25 to 43 (19 residues), see Phobius details amino acids 59 to 80 (22 residues), see Phobius details amino acids 91 to 109 (19 residues), see Phobius details amino acids 115 to 138 (24 residues), see Phobius details amino acids 148 to 167 (20 residues), see Phobius details amino acids 177 to 198 (22 residues), see Phobius details amino acids 231 to 250 (20 residues), see Phobius details amino acids 257 to 278 (22 residues), see Phobius details amino acids 291 to 308 (18 residues), see Phobius details amino acids 314 to 334 (21 residues), see Phobius details amino acids 349 to 369 (21 residues), see Phobius details amino acids 375 to 397 (23 residues), see Phobius details PF07690: MFS_1" amino acids 30 to 285 (256 residues), 103.8 bits, see alignment E=4.9e-34 amino acids 232 to 396 (165 residues), 41.8 bits, see alignment E=3.4e-15

Best Hits

Swiss-Prot: 43% identical to YGAY_ECOLI: Putative uncharacterized transporter YgaY (ygaY) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 85% identity to pva:Pvag_1323)

Predicted SEED Role

"MFS permease protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (400 amino acids)

>IAI47_10045 MFS transporter (Pantoea sp. MT58)
MTTTTCKAQEADPSPAAMPVLSPRMIFLFSLTSALAVANVYSAQPLLELIATSLQVSPGT
IGTVVTVTQTGYALGLLFLVPLGDCINRKKLVLTQLVLSVLALTAAAFAPDLMTLLCAML
LVGLMAVVTQLMVAWAAMLASPTQRGQVVGSVTSGIVIGILLARFISGMIADLAGWRAVF
LTAACLLLLISLVLVQVLPATTGQPQRTPYTQLLLSVFRLFRTEPLLRRRGILALLIFAA
FSMLWSSMVLPLTDLSLTHTAIGMFGLAGLAGALAASRAGSWADQGRGQQATGFALVLLT
FSWLPIAALQSSLLLLIVGVVLLDFAIQTVHVINQSLLVAARPEAASRLVGAYMCFYSLG
SALGAIAATQLYAHWGWQAVCYAGATASASAFLCWYGMRH