Protein Info for IAI47_09835 in Pantoea sp. MT58

Annotation: FAD-dependent urate hydroxylase HpxO

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 385 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF01494: FAD_binding_3" amino acids 2 to 338 (337 residues), 111.2 bits, see alignment E=1e-35 PF13450: NAD_binding_8" amino acids 5 to 31 (27 residues), 22.9 bits, see alignment (E = 1.2e-08)

Best Hits

Swiss-Prot: 64% identical to HPXO_KLEOX: FAD-dependent urate hydroxylase (hpxO) from Klebsiella oxytoca

KEGG orthology group: None (inferred from 96% identity to pva:Pvag_1367)

MetaCyc: 62% identical to FAD-dependent urate hydroxylase (Klebsiella pneumoniae)
RXN-11186 [EC: 1.14.13.113]

Predicted SEED Role

"Salicylate hydroxylase (EC 1.14.13.1)" in subsystem Salicylate and gentisate catabolism or Salicylate ester degradation (EC 1.14.13.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.14.13.1

Use Curated BLAST to search for 1.14.13.1 or 1.14.13.113

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (385 amino acids)

>IAI47_09835 FAD-dependent urate hydroxylase HpxO (Pantoea sp. MT58)
MKAIVIGGGIGGMSSAIALEKAGIDVEVYEAVQEMKPVGAAISIWPNGVKCLNALGMKAA
LRELGGNMAFMAYHDGATGVPLTRFSMAPLVQQVGEYPYPVARAELQAMLIDTFGRERVQ
FGKRVIQVEQTADGVIATFSDNSQATGDFLIAADGTHSVIREYVLEEKLERRYAGYVNWN
GLVTIDERIAPADQWTTFVGDGKRVSLMPVSGNRFYFFFDVPLPKGLPQDRSTVKADLTG
YFQGWAESVQQLIAAINPDTTNRVEIHDIEPFSRFVKGRVALLGDAAHSTTPDIGQGGCA
AMEDAVVLASTLASHSLGIEDALLRYQARRVERVKDLVLKARKRCDVTHARDPAVTAEWY
QSLKNETGERVLAGMCETIEGGPLG