Protein Info for IAI47_09600 in Pantoea sp. MT58

Annotation: VOC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF21723: DUF1338_N
  • amino acids 10 to 191 (182 residues), 215.3 bits, E=5.6e-68
• PF07063: DUF1338
  • amino acids 196 to 399 (204 residues), 219.2 bits, E=4.1e-69

Best Hits

Swiss-Prot: 73% identical to YDCJ_ECOLI: Uncharacterized protein YdcJ (ydcJ) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 93% identity to pva:Pvag_1415)

MetaCyc: 58% identical to 2-oxoadipate dioxygenase/decarboxylase (Pseudomonas putida KT2440)
RXN-21282 [EC: 1.13.11.93]

Predicted SEED Role

"FIG074102: hypothetical protein"

MetaCyc Pathways

• L-lysine degradation V (3/9 steps found)
• superpathway of L-lysine degradation (12/43 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.13.11.93

Protein Sequence (447 amino acids)

>IAI47_09600 VOC family protein (Pantoea sp. MT58)
MDNFISADLIRTRFSQAMSAMYQQEVPQYGTLMQLVATVNERVLEADSALKDRLTAADEI
GRLNVERHGAIRVGTADELATLRQVFAVMGMHPVGYYDLSQAGVPVHSTAFRPVTDAALR
RNPFRVFTSLLRPELIDDAALREKAAEILSARDIFTPRCRALLQLHQQQGGLTEEQAGEF
VTEALETFRWHAHSSVDSQTYQALNQQHRLIADVVCFPGCHINHLTPRTLDIDRVQQLMP
SRGIDPKTLIEGPPRRQVPILLRQTSFKALEEPIIFKEGHQGTHTARFGEIEQRGAALTP
AGRALYDRLLSEAGSGQDNQQHQQHLSTIFRDFPDDETTLRQQGLAWFHYRLSEKGIATP
PAQGESLETLIKEGRVLADPITYEDFLPVSAAGIFQSNLGDRAQVRSAGQASRQAFEAAL
GTPVLDEMALYEERQQRSLAQCGLREA