Protein Info for IAI47_09515 in Pantoea sp. MT58

Annotation: FMN-dependent NADH-azoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 199 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF02525: Flavodoxin_2" amino acids 2 to 195 (194 residues), 179.4 bits, see alignment E=7.3e-57 PF03358: FMN_red" amino acids 3 to 173 (171 residues), 55.9 bits, see alignment E=3.7e-19

Best Hits

Swiss-Prot: 80% identical to AZOR_CROS8: FMN-dependent NADH-azoreductase (azoR) from Cronobacter sakazakii (strain ATCC BAA-894)

KEGG orthology group: K01118, FMN-dependent NADH-azoreductase [EC: 1.7.-.-] (inferred from 96% identity to pva:Pvag_1434)

MetaCyc: 80% identical to FMN dependent NADH:quinone oxidoreductase (Escherichia coli K-12 substr. MG1655)
RXN0-5375 [EC: 1.7.1.17]; 1.6.5.- [EC: 1.7.1.17]

Predicted SEED Role

"FMN-dependent NADH-azoreductase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.7.-.- or 1.7.1.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (199 amino acids)

>IAI47_09515 FMN-dependent NADH-azoreductase (Pantoea sp. MT58)
MSKVLVLKSSILAGYSQSSQLADFYVEQAKAQGKEVTVRDLAANPIPVLDGELVGAMRPS
DTPLSPRQQEALDLSDELIAELQAHDEIVIAAPMYNFNIPTQLKNYFDLIARAGVTFRYT
EAGPEGLVKGKTAVVISSRGGIHKDTPTDLLTPYVKLFLGFIGITDVEFVFAEGIAYGPE
VASKATAEAKDAITQIVTA