Protein Info for IAI47_09085 in Pantoea sp. MT58

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 39 to 197 (159 residues), 105.9 bits, E=4.2e-34
• PF08352: oligo_HPY
  • amino acids 248 to 313 (66 residues), 77.9 bits, E=9.2e-26
• TIGR01727: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
  • amino acids 248 to 331 (84 residues), 78.8 bits, E=1.3e-26

Best Hits

Swiss-Prot: 87% identical to OPPD_ECOLI: Oligopeptide transport ATP-binding protein OppD (oppD) from Escherichia coli (strain K12)

KEGG orthology group: K02031, peptide/nickel transport system ATP-binding protein (inferred from 98% identity to pva:Pvag_1525)

MetaCyc: 87% identical to murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (Escherichia coli K-12 substr. MG1655)
3.6.3.23-RXN [EC: 7.4.2.6]; 7.4.2.6 [EC: 7.4.2.6]

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.6

Protein Sequence (338 amino acids)

>IAI47_09085 ABC transporter ATP-binding protein (Pantoea sp. MT58)
MTIHEFQPAMAARAGSEQLLTVKDLRVTFGTHDGDVTAVNDLNFSLRAGETLGIVGESGS
GKSQTAFALMGLLAKNGRIGGSAMFNGKEILNLPENQLNKLRAEQIAMIFQDPMTSLNPY
MRVGEQLMEVLKLHKGMNSAQAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIA
MALLCRPKLLIADEPTTALDVTVQAQIMTLLNDLKREFNTAIIMITHDLGVVAGICDKVL
VMYAGRTMEYGSARDVFYQPAHPYSIGLLNAVPRLDAIEGETLATIPGNPPNLLRLPQGC
PFQPRCPHAMDICTQAPPLEPFGNGRLRACFKPVEELV